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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs13175695 chr5:176699811 A/G LOC388955 chr2:63849182-63850159:- 0.77 11.45 1.35E-19 Box Plot
THYM rs13177748 chr5:176643954 T/G LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs13177762 chr5:176535206 C/T LOC388955 chr2:63849182-63850159:- -0.76 -10.57 9.82E-18 Box Plot
THYM rs13185316 chr5:176640340 T/C LOC388955 chr2:63849182-63850159:- -0.84 -12.19 3.85E-21 Box Plot
THYM rs13296 chr6:44218120 A/G HSP90AB2P chr4:13335038-13340281:+ 0.72 8.98 2.5E-14 Box Plot
THYM rs1363405 chr5:176636882 A/G LOC388955 chr2:63849182-63850159:- 0.53 7.53 2.93E-11 Box Plot
THYM rs1378358 chr17:44787312 C/T LOC644172 chr17:43677491-43679748:- 1.08 11.01 1.17E-18 Box Plot
THYM rs1378358 chr17:44787312 C/T LRRC37A4 chr17:43578685-43595516:- -0.6 -9.66 8.83E-16 Box Plot
THYM rs1408811 chr9:12575421 G/T HNRNPCL1 chr1:12907261-12908578:- 0.6 7.96 3.71E-12 Box Plot
THYM rs141783865 chr17:44755729 A/C LOC644172 chr17:43677491-43679748:- 1.11 11.45 1.37E-19 Box Plot
THYM rs141783865 chr17:44755729 A/C LRRC37A4 chr17:43578685-43595516:- -0.6 -9.7 7.22E-16 Box Plot
THYM rs142082097 chr22:28125557 GA/G BRDT chr1:92414928-92479983:+ 0.98 7.57 2.45E-11 Box Plot
THYM rs142112664 chr9:97341607 T/C TFF2 chr21:43766466-43771237:- 0.69 7.5 3.41E-11 Box Plot
THYM rs142167 chr17:44795234 C/T LOC644172 chr17:43677491-43679748:- -0.84 -8.7 9.87E-14 Box Plot
THYM rs142167 chr17:44795234 C/T LRRC37A4 chr17:43578685-43595516:- 0.45 7.48 3.68E-11 Box Plot